Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925614.1_cds_XP_016473835.1_65921
CDS Infomation

[gene=LOC107795674] [db_xref=GeneID:107795674] [protein=putative late blight resistance protein homolog R1B-14 isoform X2] [protein_id=XP_016473835.1] [location=join(114946..114951,120871..122946)] [gbkey=CDS]
Sequence

ATGCAGGATACTTTCTTGGAGGTTAAACAAGTGGTTGGCTTTGATGACAAAGCGAAATAT
GTGATTAGACGACTTATTGAAGGATCAGAGGATCTGGAGTTTGTCCCTATTGTAGGTATG
GCCGGACTTGGCAAAACCACACTGGCAAGAAAAGTATGGAGTGATTCTCAGGTTACAACT
GAATTTTCCAAGAACATTTGGGTTTCTGTCGGCCAGTCAAACGAACTAAAGCAAATCTTT
TTTGTGATTCTCAAATTCATGGGAGGCGTTGAAGAATTTCGCTGTGATGATGGGAAAGAA
TTGGCTAAAGTAATACGTGAATTTGTGACTGAAAAAGACAAATGTCTCATTGTCTTGGAC
AATGTGTGGGCAAGAGACCTTGTGGATTTTGTCAAAAACGTACTCCCAGAAAACAAGAAA
GGTCATAGGATCATGATGACCACTCGCCTCAGAGATGTAGCTAGCTATGCCAGTGAATAT
CCTTATGATCTGAAATTTTTGACTTCGGATGAAAGTTTTCAGTTGCTTAAAAAGAGAGTT
TTCGGCAGTGGAAGGTGTAGCGATGACTTAGTAAAACTTGGAAAAAGTATTGCAAGGAAA
TGTAGCGGATTACCACTTGCATTAGTGGTAATTGCTGAAGCTTTACTAAAGGTTCATCCG
ACCGAATATGATTGGGGAAAAATCGAGGACAATGTGTGGCAGCACCTTGTGAAAGAGAAT
GACCCAACCAGCTGCTGGAAAATTGTGGAAACCAATTACAAAAGTTTGTCCACAGAAATG
AAGGCGTGCTTCTTGTATTGCCTGGCTTTTCCTAAAGGCTATGATATCCCTGCTCAGAAA
TTGATTCGCTTGTGGATCGCAGAGGGATTAATAAGGTCCAGCCCCCGGAATACCCTCGAG
GAGATAGCAGAGAGTTATTTGGGGAAGCTCGAGGAGAGGGATCTAGTGACATTATCGAGA
GAAATTACTGGTCCAATAAAAAAGGTCAAATGTAATGACATGTTCTATGAGTTCTACAAG
ATGGAAGTAAATAACGAAAGGGTTTTTCAAGAACTACGTCTAACACCCGATCAGGGTCTT
CCATCCATACGAGATCCAGATATTTCTCGTCGATTGCATATTGAATTCTCTGCTCTGTCT
GATTTTATCTCCACAAAACCTATTGCAGAACATGTTAGATCTTTCTTATGTTTTTCCTCG
GAAGAACAATCCCAGTTTTCTGCTCCTGACAATTTTCAACTCATCCTCAAAGCATTTCCA
CTGATCAGGGTCTTGAAAATTGAACCCGTCAAAATTCCATCCTCCAAGTATCTTAACCAA
CTGTTTCATCTGAGGTATATTTCAATCTCAGGTGATTTCAAGGAACTTCCTGCATTCTTT
GGTAAGTTCTGGAATTTACAGTCGATTATAATTAATACAAGTACACCCGAGCCCACTCTT
AACATAAAAGCAAATATATGGAACCTTTCACAGTTGAGGCATTTCCAAACCAACAAACCT
GCAAAATTGCCGCTCCCTTCTACCCAAAAGGGTGAAGGTCGTTCCAGCCTACAAACTCTT
TCTATTGTTGCACCAGAAAGTTGCAACAAAGTTGTGCTTAGGAATGCTAGGAATCTCAAA
AAACTGAGTATGCGAGGCCGAATAGAAGATTTTCTTCAAACTAACAAGGATGGATTCAGC
ACTTTTGAAGGGTTTAACTGTCTAGAGAATTTGAAACTGATAAGTGTTGATCCTTGCACT
AGTGATGCTCTTCAGCTTCCAAGAGCATTATTCAGATTTCTACTCAAGCTTAAGAAGTTA
ACTTTGTCAAACACAATGTTTGATTGGAACGATGCGACTAAACTGGGGCAGTTGGAATGC
CTTAAGGTCCTAAAGTTGAAAAAAGATGCATTCACGGGGAGATTGTGGAATCCGGTGATA
GGTGATTTTCGAGAACTGCAGGTCTTGTGGATTCAAAACGATGACCTCCAACGTTGGGAG
GCTACAAGAGTTCACTTCCCAAAAGTCAGGAAACTTGTTCTTAAGTGTCCTAATCTTGAG
AGTGAACCAGCTGAGCTATCTGAGTTTAAGCAGACGAGTTAA

Peptide Sequence

PEP ID

XP_016473835.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-14 isoform X2 [Nicotiana tabacum]
Sequence

MQDTFLEVKQVVGFDDKAKYVIRRLIEGSEDLEFVPIVGMAGLGKTTLARKVWSDSQVTT
EFSKNIWVSVGQSNELKQIFFVILKFMGGVEEFRCDDGKELAKVIREFVTEKDKCLIVLD
NVWARDLVDFVKNVLPENKKGHRIMMTTRLRDVASYASEYPYDLKFLTSDESFQLLKKRV
FGSGRCSDDLVKLGKSIARKCSGLPLALVVIAEALLKVHPTEYDWGKIEDNVWQHLVKEN
DPTSCWKIVETNYKSLSTEMKACFLYCLAFPKGYDIPAQKLIRLWIAEGLIRSSPRNTLE
EIAESYLGKLEERDLVTLSREITGPIKKVKCNDMFYEFYKMEVNNERVFQELRLTPDQGL
PSIRDPDISRRLHIEFSALSDFISTKPIAEHVRSFLCFSSEEQSQFSAPDNFQLILKAFP
LIRVLKIEPVKIPSSKYLNQLFHLRYISISGDFKELPAFFGKFWNLQSIIINTSTPEPTL
NIKANIWNLSQLRHFQTNKPAKLPLPSTQKGEGRSSLQTLSIVAPESCNKVVLRNARNLK
KLSMRGRIEDFLQTNKDGFSTFEGFNCLENLKLISVDPCTSDALQLPRALFRFLLKLKKL
TLSNTMFDWNDATKLGQLECLKVLKLKKDAFTGRLWNPVIGDFRELQVLWIQNDDLQRWE
ATRVHFPKVRKLVLKCPNLESEPAELSEFKQTS

Transcript Sequence

Gene sequence data has not been registered.